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Creators/Authors contains: "Kim, Dongmin"

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  1. Abstract The current state-of-the-art climate models when combined together suggest that the anthropogenic weakening of the Atlantic Meridional Overturning Circulation (AMOC) has already begun since the mid-1980s. However, continuous direct observational records during the past two decades have shown remarkable resilience of the AMOC. To shed light on this apparent contradiction, here we attempt to attribute the interdecadal variation of the historical AMOC to the anthropogenic and natural signals, by analyzing multiple climate and surface-forced ocean model simulations together with direct observational data. Our analysis suggests that an extensive weakening of the AMOC occurred in the 2000s, as evident from the surface-forced ocean model simulations, and was primarily driven by anthropogenic forcing and possibly augmented by natural variability. However, since the early 2010s, the natural component of the AMOC has greatly strengthened due to the development of a strong positive North Atlantic Oscillation. The enhanced natural AMOC signal in turn acted to oppose the anthropogenic weakening signal, leading to a near stalling of the AMOC weakening. Further analysis suggests that the tug-of-war between the natural and anthropogenic signals will likely continue in the next several years. 
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    Free, publicly-accessible full text available December 1, 2025
  2. Theory is a critical component of the biological research process, and complements observational and experimental approaches. However, most biologists receive little training on how to frame a theoretical question and, thus, how to evaluate when theory has successfully answered the research question. Here, we develop a guide with six verbal framings for theoretical models in biology. These correspond to different personas one might adopt as a theorist: ‘Advocate’, ‘Explainer’, ‘Instigator’, ‘Mediator’, ‘Semantician' and ‘Tinkerer’. These personas are drawn from combinations of two starting points (pattern or mechanism) and three foci (novelty, robustness or conflict). We illustrate each of these framings with examples of specific theoretical questions, by drawing on recent theoretical papers in the fields of ecology and evolutionary biology. We show how the same research topic can be approached from slightly different perspectives, using different framings. We show how clarifying a model’s framing can debunk common misconceptions of theory: that simplifying assumptions are bad, more detail is always better, models show anything you want and modelling requires substantial maths knowledge. Finally, we provide a roadmap that researchers new to theoretical research can use to identify a framing to serve as a blueprint for their own theoretical research projects. 
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  3. Who conducts biological research, where they do it and how results are disseminated vary among geographies and identities. Identifying and documenting these forms of bias by research communities is a critical step towards addressing them. We documented perceived and observed biases in movement ecology, a rapidly expanding sub-discipline of biology, which is strongly underpinned by fieldwork and technology use. We surveyed attendees before an international conference to assess a baseline within-discipline perceived bias (uninformed perceived bias). We analysed geographic patterns inMovement Ecologyarticles, finding discrepancies between the country of the authors’ affiliation and study site location, related to national economics. We analysed race-gender identities of USA biology researchers (the closest to our sub-discipline with data available), finding that they differed from national demographics. Finally, we discussed the quantitatively observed bias at the conference, to assess within-discipline perceived bias informed with observational data (informed perceived bias). Although the survey indicated most conference participants as bias-aware, conversations only covered a subset of biases. We discuss potential causes of bias (parachute-science, fieldwork accessibility), solutions and the need to evaluate mitigatory action effectiveness. Undertaking data-driven analysis of bias within sub-disciplines can help identify specific barriers and move towards the inclusion of a greater diversity of participants in the scientific process. 
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    Free, publicly-accessible full text available July 1, 2026
  4. de_Oliveira, Mozaniel Santana (Ed.)
    Mycolactone is a cytotoxic lipid metabolite produced byMycobacterium ulcerans, the environmental pathogen responsible for Buruli ulcer, a neglected tropical disease.Mycobacterium ulceransis prevalent in West Africa, particularly found in lentic environments, where mosquitoes also occur. Researchers hypothesize mosquitoes could serve as a transmission mechanism resulting in infection byM.ulceranswhen mosquitoes pierce skin contaminated withM.ulcerans. The interplay between the pathogen, mycolactone, and mosquito is only just beginning to be explored. A triple-choice assay was conducted to determine the host-seeking preference ofAedes aegyptibetweenM.ulceranswildtype (MU, mycolactone active) and mutant (MUlac-, mycolactone inactive). Both qualitative and quantitative differences in volatile organic compounds’ (VOCs) profiles of MU and MUlac-were determined by GC-MS. Additionally, we evaluated the interplay betweenAe.aegyptiproximity andM.ulceransmRNA expression. The results showed that mosquito attraction was significantly greater (126.0%) to an artificial host treated with MU than MUlac-. We found that MU and MUlacproduced differential profiles of VOCs associated with a wide range of biological importance from quorum sensing (QS) to human odor components. RT-qPCR assays showed that mycolactone upregulation was 24-fold greater for MU exposed toAe.aegyptiin direct proximity. Transcriptome data indicated significant induction of ten chromosomal genes of MU involved in stress responses and membrane protein, compared to MUlac-when directly having access to or in near mosquito proximity. Our study provides evidence of possible interkingdom interactions between unicellular and multicellular species that MU present on human skin is capable of interreacting with unrelated species (i.e., mosquitoes), altering its gene expression when mosquitoes are in direct contact or proximity, potentially impacting the production of its VOCs, and consequently leading to the stronger attraction of mosquitoes toward human hosts. This study elucidates interkingdom interactions between viableM.ulceransbacteria andAe.aegyptimosquitoes, which rarely have been explored in the past. Our finding opens new doors for future research in terms of disease ecology, prevalence, and pathogen dispersal outside of theM.ulceranssystem. 
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  5. Free, publicly-accessible full text available December 1, 2026
  6. Abstract Numerous theoretical models have demonstrated that migration, a seasonal animal movement behaviour, can minimize the risks and costs of parasite infection. Past work on migration–infection interactions assumes migration is the only strategy available to organisms for dealing with the parasite infection, that is they migrate to a different environment to recover or escape from infection. Thus, migration is similar to the non‐spatial strategy of resistance, where hosts prevent infection or kill parasites once infected. However, an alternative defence strategy is to tolerate the infection and experience a lower cost to the infection. To our knowledge, no studies have examined how migration can change based on combining two host strategies (migration and tolerance) for dealing with parasites.In this paper, we aim to understand how both parasite transmission and infection tolerance can influence the host's migratory behaviour.We constructed a model that incorporates two host strategies (migration and tolerance) to understand whether allowing for tolerance affects the proportion of the population that migrates at equilibrium in response to infection.We show that the benefits of tolerance can either decrease or increase the host's migration. Also, if the benefit of migration is great, then individuals are more likely to migrate regardless of the presence of tolerance. Finally, we find that the transmission rate of parasite infection can either decrease or increase the tolerant host's migration, depending on the cost of migration.These findings highlight that adopting two defence strategies is not always beneficial to the hosts. Instead, a single strategy is often better, depending on the costs and benefits of the strategies and infection pressures. Our work further suggests that multiple host‐defence strategies as a potential explanation for the evolution of migration to minimize the parasite infection. Moreover, migration can also affect the ecological and evolutionary dynamics of parasite–host interactions. 
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